Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTATAGCTGTAGGGCTGA
...(((((((((((((((((.&))))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243879
GeneSymbolTRA2B
Binding site3269,3289
Score0.872
Seed0
Au0.662
Energy-20.5
Binding len20
Me-6.515
Phylopstem3.570799842105263
Phylopflank4.5536047462500004
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure