Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATCACAGCCGCAGCTCTGTTCAGCGGA
((((((((((((((((...((&))...)))))))))))).......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243892
GeneSymbolTPD52L2
Binding site635,664
Score0.923
Seed1
Au0.324
Energy-22.7
Binding len29
Me-3.938
Phylopstem0.26463568695652173
Phylopflank0.32265479500000005
Longest consecutive pairings12
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure