Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTTCTCTTCTCAACCGTGGCAGCT
..((.((((((((((.((((.&.))))..)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243892
GeneSymbolTPD52L2
Binding site1427,1456
Score0.846
Seed0
Au0.441
Energy-20.8
Binding len21
Me-9.309
Phylopstem0.6298345000000001
Phylopflank0.17625675125
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure