Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATCACAGCCGCAGCTCTGTTCAGCGGA
((((((((((((((((...((&))...)))))))))))).......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243894
GeneSymbolTPD52L2
Binding site602,631
Score0.923
Seed1
Au0.324
Energy-22.7
Binding len29
Me-3.938
Phylopstem0.6254189652173913
Phylopflank0.9415107987500001
Longest consecutive pairings12
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure