Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGAGAGAGACCGCTGGCTTTTTGTAGCAAC
(((((((((((((((((((((&)))))))).......))))).)))).......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243900
GeneSymbolHDLBP
Binding site203,240
Score0.923
Seed1
Au0.559
Energy-21.7
Binding len37
Me-3.938
Phylopstem0.05774341944444444
Phylopflank1.0050389025
Longest consecutive pairings8
Position of longest consecutive pairings29
Pairings in 3prime end8
PositionCDS
2D Structure