Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCGCAGCCGTGGCTA
....((((((((((((..(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243900
GeneSymbolHDLBP
Binding site4216,4234
Score0.923
Seed0
Au0.426
Energy-20.7
Binding len18
Me-9.547
Phylopstem3.7749965
Phylopflank4.939975887500001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure