Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGATTTCTGCGGCCGCCAGCTCCCGCGAC
(((((((((((((((((....&.))))))))).))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243925
GeneSymbolMAPKAPK3
Binding site9,42
Score0.808
Seed1
Au0.265
Energy-21.7
Binding len23
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end4
Position5UTR
2D Structure