Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTGCTGGGTA
(((((((((((...........&))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001243960
GeneSymbolNEDD4L
Binding site5729,5741
Score0.846
Seed1
Au0.471
Energy-17.3
Binding len12
Me-10.399
Phylopstem-1.0238036363636362
Phylopflank-0.910643935
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure