Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGCAGAGGAGGTAGA
.....((((..((((((((((&))))))..))))..)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001243961
GeneSymbolHLA-DQB1
Binding site1358,1377
Score0.846
Seed0
Au0.574
Energy-21.3
Binding len19
Me-17.733
Phylopstem2.423209848333333
Phylopflank-0.07725183424999987
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure