Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCCTGTGCATGGCCAGCTGCGT
.(((((((((.(.((((((((&.)))).))))).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243961
GeneSymbolHLA-DQB1
Binding site1062,1090
Score0.923
Seed1
Au0.412
Energy-21.5
Binding len23
Me-7.907
Phylopstem1.59430445
Phylopflank1.847398515
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure