Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGGCTCCTGTGCGTGTCTCCATGCAGCTGCGGCGGCC
..((.((((((((((((.((.&.)).)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243985
GeneSymbolRELA
Binding site865,908
Score0.846
Seed0
Au0.309
Energy-24.9
Binding len20
Me-9.076
Phylopstem1.3438261083333334
Phylopflank1.5311629137500002
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure