Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGACAGCTGCAAGCA
.....(((((((((((.((((&))))..))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243998
GeneSymbolSPIB
Binding site98,117
Score0.846
Seed0
Au0.426
Energy-20.0
Binding len19
Me-13.666
Phylopstem4.719797083333332
Phylopflank4.189199414999999
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure