Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGGACCACGAGCCGCAGCTA
....((((((((((....(((&.)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244
GeneSymbolTNFSF8
Binding site376,401
Score0.846
Seed0
Au0.382
Energy-21.1
Binding len18
Me-10.515
Phylopstem0.08717876
Phylopflank0.24288575499999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure