Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGGAGATGTACGACCGCGCTGCAGA
(((((((.(((((((((....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244008
GeneSymbolKIF1A
Binding site2620,2647
Score0.923
Seed1
Au0.382
Energy-26.3
Binding len18
Me-6.251
Phylopstem-1.3016560111111113
Phylopflank-0.8276057487499999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure