Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCGAGGCAGCCTGCC
..((((((((..(((((((((&))))))))).))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244071
GeneSymbolGIMAP6
Binding site1953,1973
Score0.846
Seed1
Au0.485
Energy-21.2
Binding len20
Me-11.129
Phylopstem-0.37029926666666657
Phylopflank-0.2543259025
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure