Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTAGAATTGTTGGCTGGGTG
(((((((..(((((........&.)))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001244191
GeneSymbolKIAA0586
Binding site5342,5364
Score0.846
Seed1
Au0.544
Energy-15.6
Binding len16
Me-8.276
Phylopstem0.4191992857142857
Phylopflank-0.13498267625000004
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure