Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTAGAATTTCACCCAGTGGAATTGATTCAGCTACAACCGTGGCTGCAGC
(((((((((((((((((....&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244191
GeneSymbolKIAA0586
Binding site534,584
Score0.923
Seed1
Au0.441
Energy-28.8
Binding len19
Me-3.938
Phylopstem0.6115364588235296
Phylopflank2.29874043625
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure