Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAAACAGCTGCAGCTTTGGGCAT
.(((((((((((((((..((.&))..))))))))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244584
GeneSymbolFMC1-LUC7L2
Binding site1763,1787
Score1.0
Seed1
Au0.603
Energy-23.5
Binding len24
Me-3.793
Phylopstem1.4833625263157897
Phylopflank1.95859189625
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure