Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCAACTGGCCAGAAGAGGAGCAGCTGCAGT
((((((((((..((....(((&.)))....))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244638
GeneSymbolARID5B
Binding site4182,4214
Score0.846
Seed1
Au0.456
Energy-20.8
Binding len24
Me-11.078
Phylopstem0.051362679999999994
Phylopflank0.48575563749999995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure