Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGGTGACGCGGCTGCGGT
(((((((((((.......((.&))......))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244644
GeneSymbolCHMP2B
Binding site23,43
Score0.923
Seed1
Au0.309
Energy-20.7
Binding len20
Me-10.399
Phylopstem0.41915539999999996
Phylopflank1.1838080327380953
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure