Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATCGACATGATGGACTCTCGGACCAGCCAGCAGCTGCAGC
(((((((((((((((......&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244666
GeneSymbolSTX5
Binding site846,889
Score0.923
Seed1
Au0.441
Energy-25.3
Binding len18
Me-4.171
Phylopstem6.0510031249999985
Phylopflank4.921868680000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure