Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGCACACCCTGCCAACCCCACCGCCGCGGCTGCC
..(((((((((((.((..(((&.)))..)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244705
GeneSymbolCSAD
Binding site140,179
Score1.0
Seed1
Au0.235
Energy-27.2
Binding len21
Me-5.814
Phylopstem-0.05199191818181821
Phylopflank0.08030492750000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure