Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGTAACTGCGGCTTGGTTTTCCACCTGCAAG
(((((((((((((((((.(((&))).))))))))))))).............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244764
GeneSymbolTNIP3
Binding site1124,1159
Score0.846
Seed1
Au0.412
Energy-20.4
Binding len35
Me-3.938
Phylopstem-0.06450124
Phylopflank-0.50175218
Longest consecutive pairings13
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure