Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCTTCCCCGAGCAGCTGCC
..((((((((((..((..(((&))).))..))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244812
GeneSymbolFOXP1
Binding site3227,3250
Score0.923
Seed1
Au0.382
Energy-21.2
Binding len23
Me-7.103
Phylopstem0.006207942857142863
Phylopflank1.2269497875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure