Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGAACTGCAGTCCTGCC
..((((((((((((.((((((&))))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244813
GeneSymbolFOXP1
Binding site2176,2197
Score1.0
Seed1
Au0.485
Energy-19.5
Binding len21
Me-5.692
Phylopstem2.43408334
Phylopflank2.0385388127499997
Longest consecutive pairings14
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure