Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGTGCACCTAAGCTGCAGA
((((((((..((.((((((((&)))).))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244813
GeneSymbolFOXP1
Binding site2226,2248
Score0.846
Seed1
Au0.471
Energy-19.5
Binding len22
Me-7.526
Phylopstem0.38824686222222227
Phylopflank1.6109428457500004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure