Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCTTCCCCGAGCAGCTGCC
..((((((((((..((..(((&))).))..))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244814
GeneSymbolFOXP1
Binding site3525,3548
Score0.923
Seed1
Au0.382
Energy-21.2
Binding len23
Me-7.103
Phylopstem0.008824357142857167
Phylopflank1.0932453987500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure