Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGAACTGCAGTCCTGCC
..((((((((((((.((((((&))))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244815
GeneSymbolFOXP1
Binding site2266,2287
Score0.923
Seed1
Au0.485
Energy-19.5
Binding len21
Me-5.692
Phylopstem1.7638956642857144
Phylopflank1.278943657
Longest consecutive pairings14
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure