Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACGGCGCGGGTGCGC
.((((.((((.((((((((((&)))))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244846
GeneSymbolCHEK1
Binding site771,791
Score0.923
Seed0
Au0.324
Energy-23.4
Binding len20
Me-8.519
Phylopstem2.1537731
Phylopflank0.29334512999999984
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end8
Position5UTR
2D Structure