Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATATCTTGAAAGCTATATTGTGGGCTTGGTA
(((.(((.((((((((((.(((&.))).)))))))))).))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001244896
GeneSymbolPTBP3
Binding site2701,2734
Score0.846
Seed0
Au0.706
Energy-18.4
Binding len24
Me-9.283
Phylopstem0.33779026
Phylopflank0.022721318750000004
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure