Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAAGCTGCACTGCAGG
((((((.(((((((....(((&)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244896
GeneSymbolPTBP3
Binding site385,404
Score0.846
Seed0
Au0.441
Energy-19.4
Binding len19
Me-6.45
Phylopstem-1.4826685714285712
Phylopflank-0.34319687750000005
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure