Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATTGCAACCGGCAGTGGTGACAACACCTGCAAA
((((((((((((((((((.((&)).))))))))).)))............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244926
GeneSymbolPRPF4
Binding site1344,1379
Score0.846
Seed1
Au0.426
Energy-21.3
Binding len35
Me-3.938
Phylopstem4.711788343548388
Phylopflank4.604873561874999
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure