Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAGCCGCTCGTCAGACTCCAGCAGCC
..((.(((((((((((((((.&))))))))))))............))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244938
GeneSymbolTXN
Binding site38,69
Score0.923
Seed0
Au0.426
Energy-23.8
Binding len31
Me-9.076
Phylopstem0.08837365185185185
Phylopflank-0.25230142964285723
Longest consecutive pairings12
Position of longest consecutive pairings19
Pairings in 3prime end7
Position5UTR
2D Structure