Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCATTGCTGCAAAGAGCTGCT
..(((((((((((((..((((&))))..))..))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244949
GeneSymbolGPAM
Binding site4577,4603
Score0.808
Seed1
Au0.5
Energy-21.1
Binding len26
Me-5.19
Phylopstem4.863693631578947
Phylopflank4.7751874075
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure