Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTGCAGCTGGCAT
.((((((((((((.((.....&)).)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244949
GeneSymbolGPAM
Binding site2,19
Score0.846
Seed1
Au0.312
Energy-20.3
Binding len17
Me-4.65
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end2
Position5UTR
2D Structure