Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCCGAAAGCTGCAGC
((((((((((((((((.....&))))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244950
GeneSymbolSPOCK2
Binding site2731,2752
Score0.923
Seed1
Au0.412
Energy-22.4
Binding len21
Me-3.938
Phylopstem-0.07956442999999998
Phylopflank-0.5045269972499999
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end3
Position3UTR
2D Structure