Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTAGAACTTATGCCATGGA
.(((((((((...(.(((((((&))))))).)...))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001244960
GeneSymbolFRMD3
Binding site3398,3421
Score0.846
Seed1
Au0.588
Energy-17.8
Binding len23
Me-11.989
Phylopstem5.004889599999999
Phylopflank5.0715683375000005
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure