Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTTAGGATTCACAGCTGCAGG
(((((((((.((((.(((((.&))))).))).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244961
GeneSymbolFRMD3
Binding site220,242
Score0.846
Seed1
Au0.588
Energy-19.0
Binding len22
Me-5.916
Phylopstem4.433532277777777
Phylopflank2.468491749999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure