Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTTAGGCCTCAGATCCCAGCTGTG
..(((((((.(((((((((((&)))))))..........)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244962
GeneSymbolFRMD3
Binding site877,907
Score0.923
Seed1
Au0.559
Energy-20.3
Binding len30
Me-6.2
Phylopstem2.1970816666666666
Phylopflank1.5443276041666671
Longest consecutive pairings7
Position of longest consecutive pairings23
Pairings in 3prime end8
Position3UTR
2D Structure