Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGCCGCGGCTGCT
..(((((((((((........&.))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001244974
GeneSymbolPPP1CC
Binding site60,76
Score0.923
Seed1
Au0.176
Energy-23.3
Binding len13
Me-6.782
Phylopstem2.0141513636363637
Phylopflank2.70115688
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure