Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCCGCCCCCTGGTGGCGCTGCTGGACGGCCGCGACTGCAC
.(((((.(((((((((..(((&.)))..))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363508
GeneSymbolCTBP2
Binding site505,548
Score0.846
Seed0
Au0.294
Energy-25.5
Binding len22
Me-5.337
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure