Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACAGCCGTAGTGTGGCC
..((.(((((((((((.((((&)))).)))))))))))...)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001247994
GeneSymbolPOU2F2
Binding site3720,3742
Score0.846
Seed0
Au0.382
Energy-23.8
Binding len22
Me-9.076
Phylopstem1.3131764545454543
Phylopflank0.83758592875
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure