Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATCAGCCAGCAGCTGCAGG
(((((((((((((((......&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001248006
GeneSymbolTRIM3
Binding site948,969
Score1.0
Seed1
Au0.353
Energy-25.3
Binding len18
Me-4.171
Phylopstem6.1452945
Phylopflank4.778880302499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure