Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGCAGCTGCAGCGCC
..((.(((((((((((.((((&))))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001248007
GeneSymbolTRIM3
Binding site1601,1621
Score0.846
Seed0
Au0.338
Energy-25.4
Binding len20
Me-9.076
Phylopstem5.767634727272727
Phylopflank2.8378545975000007
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure