Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCATTCAAGGCCGCAATGTAAGCCGCAGCTGCAC
.(((((((((((((....(((&.)))........))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001251882
GeneSymbolVIPR1
Binding site781,818
Score1.0
Seed1
Au0.368
Energy-27.5
Binding len26
Me-4.762
Phylopstem1.9208797261538462
Phylopflank1.2292905594999999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure