Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCATTCAAGGCCGCAATGTAAGCCGCAGCTGCAC
.(((((((((((((....(((&.)))........))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001251883
GeneSymbolVIPR1
Binding site267,304
Score1.0
Seed1
Au0.368
Energy-27.5
Binding len26
Me-4.762
Phylopstem0.2235576307692308
Phylopflank1.3712672595000002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure