Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGACAACTGCTCAGTGATGGCCGTGGATTGCGAA
((((((((((((((((.((((&))))..))))))))..............)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001251905
GeneSymbolAPPL2
Binding site1046,1084
Score0.846
Seed1
Au0.412
Energy-18.8
Binding len38
Me-3.938
Phylopstem1.3159747916129034
Phylopflank2.7183609917500005
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure