Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGGGAGGCAGCAGCTGCAT
.(((((((((.(((....(((&)))......))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001251935
GeneSymbolNR1H3
Binding site332,355
Score0.923
Seed1
Au0.353
Energy-21.3
Binding len23
Me-7.587
Phylopstem-0.015623353333333347
Phylopflank0.45587130812499993
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure