Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCCAGAGAAGAATAAACCATCCAAGAGACGGCGCTGCAGG
(((((((.((.(((....((.&.))....))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001251964
GeneSymbolTP53AIP1
Binding site1249,1293
Score0.846
Seed1
Au0.471
Energy-18.8
Binding len21
Me-10.044
Phylopstem-0.6775968571428572
Phylopflank-0.6743480725000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure