Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTGCAACTCTCATGTTCTGTGCATTGCAAGTGTGCCAGGTG
(((((((((((((((((.(...&.).))))))....))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001251971
GeneSymbolSPAG9
Binding site2105,2148
Score0.846
Seed1
Au0.485
Energy-23.7
Binding len25
Me-3.938
Phylopstem0.7713127508095238
Phylopflank0.13036923958750002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure